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24. Complexin-1 enhances ultrasound neurotransmission in the mammalian auditory pathway.
Liu ML, Wang CL, Huo LF, Cao J, Mao XG, He ZQ, Hu CX, Sun HJ, Deng WJ, He WY, Chen YF, Gu MF, Liao JY, Guo N, He XY, Wu Q, Chen JK, Zhang LB, Wang XQ, Shang CP, Dong J#
Nature Genetics (2024) 56:1503–1515.
23. Spatiotemporal transcriptome atlas reveals the regional specification of the developing human brain.
Li Y, Li Z, Wang C, Yang M, He Z, Wang F, Zhang Y, Li R, Gong Y, Wang B, Fan B, Wang C, Chen L, Li H, Shi P, Wang N, Wei Z, Wang Y, Jin L, Du P, Dong J#, Jiao J
Cell (2023) 186(26): 5892-5909. e22.
22. Brain circuits for retching-like behavior.
Huo L, Ye Z, Liu M, He Z, Huang M, Li D, Wu Q, Wang Q, Wang X, Cao P, Dong J#, Shang C
National Science Review (2023) nwad256
21. Cross-species comparison illuminates the importance of iron homeostasis for splenic anti-immunosenescence.
He Z, He W, Hu C, Liao J, Deng W, Sun H, Huang Q, Chen W, Zhang L, Liu M, Dong J#
Aging Cell (2023) e13982
20. Characterization of mesenchymal stem cells in human fetal bone marrow by single-cell transcriptomic and functional analysis.
Zhang P, Dong J*, Fan X, Yong J, Yang M, Liu Y, Zhang X, Lv L, Wen L, Qiao J, Tang F, Zhou Y.
Signal Transduction and Targeted Therapy (2023) 8 (1), p.126
19. Spatially-resolved expression landscape and gene-regulatory network of human gastric corpus epithelium.
Dong J*, Wu X, Zhou X, Gao Y, Wang C, Wang W, He W, Li J, Deng W, Liao J, Wu X, Lu Y, Chen A, Wen L, Fu W, Tang F
Protein & Cell (2022) pwac059, https://doi.org/10.1093/procel/pwac059
18. Establishment and characterization of adult human gastric epithelial progenitor-like cell lines
Gao Y, Dong J*, Qi S, Zhou X, Wu X, Wang W, Wen L, Fu W, Tang F
Cell Proliferation (2022) e13355. doi:10.1111/cpr.13355
17. Single-cell profiling reveals molecular basis of malignant phenotypes and tumor microenvironments in small bowel adenocarcinomas.
Yang J, Zhou X, Dong J*, Wang W, Lu Y, Gao Y, Zhang Y, Mao Y, Gao J, Wang W, Li Q, Gao S, Wen L, Fu W, Tang F
Cell Discovery (2022) doi.org/10.1038/s41421-022-00434-x
16. Heterogeneity in endothelial cells and widespread venous arterialization during early vascular development in mammals.
Hou S, Li Z, Dong J*, Gao Y, Chang Z, Ding X, Li S, Li Y, Zeng Y, Xin Q, Wang B, Ni Y, Ning X, Hu Y, Fan X, Hou Y, Li X, Wen L, Zhou B, Liu B, Tang F, Lan Y
Cell Research (2022) 10.1038/s41422-022-00615-z
15. Integrating single-cell datasets with ambiguous batch information by incorporating molecular network features.
Dong J, Zhou P, Wu Y, Chen Y, Xie H, Gao Y, Lu J, Yang J, Zhang X, Wen L, Li T, Tang F.
Briefings in Bioinformatics (2021) bbab366
14. Deciphering the spatial-temporal transcriptional landscape of human hypothalamus development.
Zhou X, Lu Y, Zhao F, Dong J, Ma W, Zhong S, Wang M, Wang B, Zhao Y, Shi Y, Ma Q, Lu T, Zhang J, Wang X, Wu Q.
Cell Stem Cell (2021).
13. Embryonic endothelial evolution towards first hematopoietic stem cells revealed by single-cell transcriptomic and functional analyses.
Hou S, Li Z, Zheng X, Gao Y, Dong J*, Ni Y, Wang X, Li Y, Ding X, Chang Z, Li S, Hu Y, Fan X, Hou Y, Wen L, Liu B, Tang F, Lan Y.
Cell Research (2020) 30 (5), 376-392
12. Differentiation of transplanted haematopoietic stem cells tracked by single-cell transcriptomic analysis.
Dong F, Hao S, Zhang S, Zhu C, Cheng H, Yang Z, Hamey FK, Wang X, Gao A, Wang F, Gao Y, Dong J, Wang C, Wang J, Lan Y, Liu B, Ema H, Tang F, Göttgens B, Zhu P, Cheng T.
Nature Cell Biology (2020) 22(6), 630-639
11. Single-cell RNA-seq analysis unveils a prevalent epithelial/mesenchymal hybrid state during mouse organogenesis.
Dong J, Hu Y, Fan X, Wu X, Mao Y, Hu B, Guo H, Wen L, Tang F.
Genome Biology (2018) 19 (1), 31
10. Spatial transcriptomic survey of human embryonic cerebral cortex by single-cell RNA-seq analysis.
Fan X, Dong J*, Zhong S, Wei Y, Wu Q, Yan L, Yong J, Sun L, Wang X, Zhao Y, Wang W, Yan J, Wang X, Qiao J, Tang F.
Cell Research (2018) 28 (7), 730-745
9. Single-cell multiomics sequencing and analyses of human colorectal cancer.
Bian S, Hou Y, Zhou X, Li X, Yong J, Wang Y, Wang W, Yan J, Hu B, Guo H, Wang J, Gao S, Mao Y, Dong J, Zhu P, Xiu D, Yan L, Wen L, Qiao J, Tang F, Fu W.
Science (2018) 362(6418): 1060-1063.
8. A single-cell RNA-seq survey of the developmental landscape of the human prefrontal cortex.
Zhong S, Zhang S, Fan X, Wu Q, Yan L, Dong J, Zhang H, Li L, Sun L, Pan N, Xu X, Tang F, Zhang J, Qiao J, Wang X.
Nature (2018) 555 (7697), 524
7. Single-cell DNA methylome sequencing of human preimplantation embryos.
Zhu P, Guo H, Ren Y, Hou Y, Dong J, Li R, Lian Y, Fan X, Hu B, Gao Y, Wang X, Wei Y, Liu P, Yan J, Ren X, Yuan P, Yuan Y, Yan Z, Wen L, Yan L, Qiao J, Tang F.
Nature Genetics (2018) 50 (1), 12
6. Single-cell RNA sequencing analysis reveals sequential cell fate transition during human Spermatogenesis.
Wang M, Liu X, Chang G, Chen Y, An G, Yan L, Gao S, Xu Y, Cui Y, Dong J, Chen Y, Fan X, Hu Y, Song K, Zhu X, Gao Y, Yao Z, Bian S, Hou Y, Lu J, Wang R, Fan Y, Lian Y, Tang W, Wang Y, Liu J, Zhao L, Wang L, Liu Z, Yuan R, Shi Y, Hu B, Ren X, Tang F, Zhao XY, Qiao J.
Cell Stem Cell (2018)
5. Single-cell RNA-Seq analysis maps development of human germline cells and gonadal niche interactions.
Li L, Dong J*, Yan L, Yong J, Liu X, Hu Y, Fan X, Wu X, Guo H, Wang X, Zhu X, Li R, Yan J, Wei Y, Zhao Y, Wang W, Ren Y, Yuan P, Yan Z, Hu B, Guo F, Wen L, Tang F, Qiao J.
Cell Stem Cell (2017) 20 (6), 858-873. e4
4. Repetitive transpositions of mitochondrial DNA sequences to the nucleus during the radiation of horseshoe bats (Rhinolophus, Chiroptera).
Shi H, Dong J*, Irwin DM, Zhang S, Mao X.
Gene (2016) May 1;581(2):161-9
3. The complete mitochondrial genome of a Chinese rufous horseshoe bat subspecies, Rhinolophus sinicus sinicus (Chiroptera: Rhinolophidae).
Sun H, Dong J*, Shi H, Ren M, Hua P.
Mitochondrial DNA Part A (2016) Sep 2;27(5):3301-2
2. Introgression of mitochondrial DNA promoted by natural selection in the Japanese pipistrelle bat (Pipistrellus abramus).
Dong J, Mao X, Sun H, Irwin DM, Zhang S, Hua P.
Genetica (2014): 483-494
1. Heteroplasmy and ancient translocation of mitochondrial DNA to the nucleus in the Chinese Horseshoe Bat (Rhinolophus sinicus) complex.
Mao X, Dong J*, Hua P, He G, Zhang S, Rossiter SJ.
PLoS One (2014) May 19;9(5):e98035